CDS

Accession Number TCMCG065C23287
gbkey CDS
Protein Id XP_004974230.1
Location join(35757346..35757500,35757604..35757703,35758337..35758423,35758507..35758591,35758794..35758975,35759199..35759269,35759350..35759440,35759526..35759600,35759690..35759791,35759892..35760014,35760093..35760161,35760249..35760317,35760402..35760455,35760547..35760600)
Gene LOC101754520
GeneID 101754520
Organism Setaria italica

Protein

Length 438aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA207554
db_source XM_004974173.4
Definition malate dehydrogenase [NADP] 1, chloroplastic [Setaria italica]

EGGNOG-MAPPER Annotation

COG_category C
Description The chloroplastic, NADP-dependent form is essential for the photosynthesis C4 cycle, which allows plants to circumvent the problem of photorespiration. In C4 plants, NADP-MDH activity acts to convert oxaloacetate to malate in chloroplasts of mesophyll cells for transport to the bundle sheath cells
KEGG_TC -
KEGG_Module M00172        [VIEW IN KEGG]
KEGG_Reaction R00343        [VIEW IN KEGG]
KEGG_rclass RC00031        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K00051        [VIEW IN KEGG]
EC 1.1.1.82        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00620        [VIEW IN KEGG]
ko00710        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01120        [VIEW IN KEGG]
ko01200        [VIEW IN KEGG]
map00620        [VIEW IN KEGG]
map00710        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01120        [VIEW IN KEGG]
map01200        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005576        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006091        [VIEW IN EMBL-EBI]
GO:0006099        [VIEW IN EMBL-EBI]
GO:0006101        [VIEW IN EMBL-EBI]
GO:0006107        [VIEW IN EMBL-EBI]
GO:0006108        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006732        [VIEW IN EMBL-EBI]
GO:0006733        [VIEW IN EMBL-EBI]
GO:0006734        [VIEW IN EMBL-EBI]
GO:0006753        [VIEW IN EMBL-EBI]
GO:0006793        [VIEW IN EMBL-EBI]
GO:0006796        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008746        [VIEW IN EMBL-EBI]
GO:0009060        [VIEW IN EMBL-EBI]
GO:0009117        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009526        [VIEW IN EMBL-EBI]
GO:0009532        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009570        [VIEW IN EMBL-EBI]
GO:0009579        [VIEW IN EMBL-EBI]
GO:0009941        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0015980        [VIEW IN EMBL-EBI]
GO:0016491        [VIEW IN EMBL-EBI]
GO:0016614        [VIEW IN EMBL-EBI]
GO:0016615        [VIEW IN EMBL-EBI]
GO:0016616        [VIEW IN EMBL-EBI]
GO:0016651        [VIEW IN EMBL-EBI]
GO:0016652        [VIEW IN EMBL-EBI]
GO:0016999        [VIEW IN EMBL-EBI]
GO:0017144        [VIEW IN EMBL-EBI]
GO:0019362        [VIEW IN EMBL-EBI]
GO:0019637        [VIEW IN EMBL-EBI]
GO:0019674        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0030060        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0043648        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044434        [VIEW IN EMBL-EBI]
GO:0044435        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045333        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046496        [VIEW IN EMBL-EBI]
GO:0048046        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051186        [VIEW IN EMBL-EBI]
GO:0051775        [VIEW IN EMBL-EBI]
GO:0055086        [VIEW IN EMBL-EBI]
GO:0055114        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0072350        [VIEW IN EMBL-EBI]
GO:0072524        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGTCTCTCAACAGCTTACTCCCCGGCCGGATCGCGCCTCGCCACGCCCCCTCTCGGCGCCGCCGCCACCGCGCGCCGCCGCTCCGTGCAGCCCCTCCGCCCGCGCCGGCATCACCTGCTCGCCACCGTCCGATGCTCCGTCGACGCCGCCAAGCAGGTGCAGGACGGCGCGGCGACGGTCGCGGCGGAGGCGCCAGCGTCGCGCCACGCGGAGTGCTTCGGGGTCTTCTGCACCACCTACGACCTCAAGGCGGATGACAAGACCAAGTCATGGAAGAAGCTAGTGAACATTGCTGTGTCAGGCGCGGCTGGCATGATATCAAATCATCTGCTCTTCAAACTTGCCTCTGGTGAGGTTTTTGGGCAAGACCAACCAATAGCACTTAAGTTACTTGGCTCAGAAAGATCAATACAAGCACTAGAAGGTGTAGCTATGGAACTGGAGGACTCACTATATCCATTGCTGAGGGAAGTCAGCATTGGTATAGATCCTTATGAGGTCTTTGAAGATGTAGATTGGGCCCTTCTTATTGGTGCTAAGCCCCGAGGCCCTGGAATGGAGCGAGCTGCGTTACTAGACATCAACGGCCAAATCTTTGCTGATCAGGGGAAAGCACTTAACGCCGTGGCATCGCGGAACGTGAAAGTTATAGTTGTTGGCAATCCCTGTAACACTAATGCGCTCATTTGCTTGAAAAATGCTCCAAACATTCCAGCGAAAAATTTTCATGCGCTGACGAGGTTGGACGAAAATAGAGCAAAGTGCCAGCTAGCACTAAAAGCAGGCGTGTTTTATGACAAAGTATCGAACGTGACTATTTGGGGGAACCATTCGACAACTCAGGTTCCTGATTTCTTGAATGCCAAAATTGATGGGAGACCAGTGAAAGAAGCCATTAAGGATACAAAGTGGTTAGAAGAAGAATTCACCATGACAGTTCAAAAGCGCGGTGGTGTGCTCATCCAAAAATGGGGCAGATCTTCAGCTGCATCAACCGCTGTTTCAATAGTTGATGCTATTAGATCCCTTGTAACTCCTACCCCAGAAGGCGATTCGTTCTCTTCAGGGGTTTATACTACTGGAAATCCTTATGGCATAGCAGAGGACATCGTGTTCAGTATGCCATGCAGATCAAAGGGGGATGGTGACTATGAACTAGTTAGTGATGTGTTAATGGACGATTTTCTCTGGGAACGGATTAAAAAGAGTGAAGCTGAACTGCTTGCTGAGAAGAAATGTGTTGCCCATCTTACAGGAGAGGGGAATGCATTTTGTGATCTTCCGGAAGATACCATGCTACCAGGAGAGATGTAG
Protein:  
MGLSTAYSPAGSRLATPPLGAAATARRRSVQPLRPRRHHLLATVRCSVDAAKQVQDGAATVAAEAPASRHAECFGVFCTTYDLKADDKTKSWKKLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSIQALEGVAMELEDSLYPLLREVSIGIDPYEVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASRNVKVIVVGNPCNTNALICLKNAPNIPAKNFHALTRLDENRAKCQLALKAGVFYDKVSNVTIWGNHSTTQVPDFLNAKIDGRPVKEAIKDTKWLEEEFTMTVQKRGGVLIQKWGRSSAASTAVSIVDAIRSLVTPTPEGDSFSSGVYTTGNPYGIAEDIVFSMPCRSKGDGDYELVSDVLMDDFLWERIKKSEAELLAEKKCVAHLTGEGNAFCDLPEDTMLPGEM